Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c4/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c4 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c4_mean_counts_contribs | float |
liu2026Multiomics_Lung_c4_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0831, 0.198] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 256494696 | 7.99% | 254935678 |
| chr1 | 23489711 | 9.44% | 23348018 |
| chr2 | 21165144 | 8.74% | 21036368 |
| chr3 | 16979058 | 8.56% | 16873992 |
| chr4 | 12449718 | 6.55% | 12369682 |
| chr5 | 14185785 | 7.81% | 14098961 |
| chr6 | 15431254 | 9.03% | 15337697 |
| chr7 | 13244015 | 8.31% | 13161743 |
| chr8 | 11722198 | 8.08% | 11649912 |
| chr9 | 11191375 | 8.09% | 11123423 |
| chr10 | 13138219 | 9.82% | 13058651 |
| chr11 | 13397238 | 9.92% | 13317758 |
| chr12 | 12198521 | 9.15% | 12123968 |
| chr13 | 6967288 | 6.09% | 6923968 |
| chr14 | 7967701 | 7.44% | 7920168 |
| chr15 | 8317617 | 8.16% | 8267546 |
| chr16 | 8350210 | 9.24% | 8301253 |
| chr17 | 10989474 | 13.20% | 10926220 |
| chr18 | 6133905 | 7.63% | 6094417 |
| chr19 | 7904725 | 13.49% | 7860634 |
| chr20 | 6920333 | 10.74% | 6879656 |
| chr21 | 3110128 | 6.66% | 3091096 |
| chr22 | 4940308 | 9.72% | 4912463 |
| chrX | 6208499 | 3.98% | 6169719 |
| chrY | 92272 | 0.16% | 88365 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 254935678 | 1 | 2604 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c4__mean_counts_contribs.bw | 1.54 GB | e848e913ceade0ef374cc035052e343f |
| genomic_resource.yaml | 1.3 KB | fddbd9d6d82b10c1c6e5014a159d4041 |
| statistics/ |
