Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c4/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c4
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c4_mean_pred_corrected float

liu2026Multiomics_Lung_c4_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c4_mean_pred_corrected [0.000172, 86.5]
n
140,570,433
mean
0.46
sd
1.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1405704334.38% 140568934
chr1 12922438 5.19% 12922431
chr2 11576117 4.78% 11576114
chr3 9231000 4.66% 9230993
chr4 6746483 3.55% 6746481
chr5 7711388 4.25% 7711385
chr6 8472945 4.96% 8472940
chr7 7210814 4.53% 7210810
chr8 6363977 4.38% 6363972
chr9 6157342 4.45% 6157337
chr10 7186148 5.37% 7186147
chr11 7364305 5.45% 7364297
chr12 6685421 5.02% 6685420
chr13 3771535 3.30% 3771532
chr14 4377045 4.09% 4377042
chr15 4566273 4.48% 4566267
chr16 4615955 5.11% 4615953
chr17 6150556 7.39% 6150553
chr18 3339415 4.15% 3339414
chr19 4453682 7.60% 4453682
chr20 3791884 5.88% 3791880
chr21 1701913 3.64% 1701913
chr22 2726172 5.36% 2726172
chrX 3392540 2.17% 3392539
chrY 55085 0.10% 53660
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 140568934 1 1401 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c4__mean_pred_corrected.bw 1.04 GB 17154ad2c5660a4606bb1cae7bf16c46
genomic_resource.yaml 1.27 KB 25be1dc11c667173d900629eed3e6fd0
statistics/