Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c5/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c5 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c5_mean_counts_contribs | float |
liu2026Multiomics_Lung_c5_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0826, 0.217] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 280320624 | 8.73% | 278650078 |
| chr1 | 25345690 | 10.18% | 25195984 |
| chr2 | 23370360 | 9.65% | 23230721 |
| chr3 | 18775560 | 9.47% | 18661479 |
| chr4 | 14413181 | 7.58% | 14322395 |
| chr5 | 15786256 | 8.70% | 15690859 |
| chr6 | 17029257 | 9.97% | 16927775 |
| chr7 | 14806408 | 9.29% | 14717557 |
| chr8 | 12938866 | 8.91% | 12860878 |
| chr9 | 12183098 | 8.80% | 12110970 |
| chr10 | 14167885 | 10.59% | 14083458 |
| chr11 | 14430485 | 10.68% | 14347092 |
| chr12 | 13446287 | 10.09% | 13365913 |
| chr13 | 8062628 | 7.05% | 8013014 |
| chr14 | 8702871 | 8.13% | 8651509 |
| chr15 | 8843180 | 8.67% | 8790823 |
| chr16 | 8806357 | 9.75% | 8755655 |
| chr17 | 11363229 | 13.65% | 11299090 |
| chr18 | 6749107 | 8.40% | 6706923 |
| chr19 | 8180524 | 13.96% | 8136050 |
| chr20 | 7134202 | 11.07% | 7092921 |
| chr21 | 3400491 | 7.28% | 3379379 |
| chr22 | 5144613 | 10.12% | 5115840 |
| chrX | 7063847 | 4.53% | 7021522 |
| chrY | 176242 | 0.31% | 172271 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 278650078 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c5__mean_counts_contribs.bw | 1.69 GB | 885630472c6d603717611170cf4a3179 |
| genomic_resource.yaml | 1.3 KB | 2a9911e3e7ed8f9bc96a9532695edd6d |
| statistics/ |
