Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c5/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c5_mean_pred_corrected float

liu2026Multiomics_Lung_c5_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c5_mean_pred_corrected [0.000456, 109]
n
152,546,643
mean
0.488
sd
1.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1525466434.75% 152545593
chr1 13871305 5.57% 13871297
chr2 12670176 5.23% 12670167
chr3 10155151 5.12% 10155142
chr4 7755939 4.08% 7755928
chr5 8522663 4.69% 8522658
chr6 9263415 5.42% 9263408
chr7 8011625 5.03% 8011618
chr8 6976486 4.81% 6976482
chr9 6630439 4.79% 6630431
chr10 7685235 5.74% 7685233
chr11 7893811 5.84% 7893807
chr12 7326119 5.50% 7326115
chr13 4328699 3.79% 4328698
chr14 4751155 4.44% 4751152
chr15 4821817 4.73% 4821815
chr16 4831641 5.35% 4831641
chr17 6327240 7.60% 6327237
chr18 3637651 4.53% 3637650
chr19 4609095 7.86% 4609091
chr20 3882046 6.02% 3882044
chr21 1852915 3.97% 1852915
chr22 2833782 5.58% 2833778
chrX 3810885 2.44% 3810880
chrY 97353 0.17% 96406
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 152545593 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c5__mean_pred_corrected.bw 1.13 GB 80f78aae07c2ef82874560dd15308be5
genomic_resource.yaml 1.27 KB 56da785f68e7ed92def55c617b20f2b3
statistics/