Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c6/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Lung for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c6
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c6_mean_counts_contribs float

liu2026Multiomics_Lung_c6_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Lung_c6_mean_counts_contribs [-0.0793, 0.217]
n
266,270,517
mean
0.000356
sd
0.00397

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2662705178.30% 264740808
chr1 24305795 9.76% 24167272
chr2 22388360 9.24% 22258937
chr3 17476352 8.81% 17373645
chr4 13106859 6.89% 13026857
chr5 14755065 8.13% 14668364
chr6 16036964 9.39% 15943821
chr7 13973005 8.77% 13890569
chr8 12307989 8.48% 12236458
chr9 11374798 8.22% 11309731
chr10 13707290 10.24% 13629604
chr11 14066876 10.41% 13988548
chr12 12742739 9.56% 12669643
chr13 7265845 6.35% 7222737
chr14 8118553 7.58% 8072290
chr15 8562042 8.39% 8513130
chr16 8626599 9.55% 8579431
chr17 11231228 13.49% 11170068
chr18 6164548 7.67% 6126825
chr19 8293532 14.15% 8249435
chr20 7016752 10.89% 6977772
chr21 3186421 6.82% 3167863
chr22 5147577 10.13% 5120377
chrX 6311227 4.04% 6274733
chrY 104101 0.18% 102698
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 264740808 1 992 1.01 1
global segment-length histogram

Files

Filename Size md5
Lung_c6__mean_counts_contribs.bw 1.6 GB 0401fc9bcf29449f0d7ff01c11e55455
genomic_resource.yaml 1.3 KB f7eb78c9629229d332538776f580fc76
statistics/