Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c6/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c6_mean_pred_corrected float

liu2026Multiomics_Lung_c6_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c6_mean_pred_corrected [0.000777, 100]
n
145,413,485
mean
0.502
sd
1.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1454134854.53% 145413333
chr1 13343132 5.36% 13343119
chr2 12171437 5.03% 12171415
chr3 9464899 4.77% 9464893
chr4 7072835 3.72% 7072829
chr5 7967584 4.39% 7967576
chr6 8763267 5.13% 8763257
chr7 7571364 4.75% 7571355
chr8 6655673 4.59% 6655666
chr9 6232347 4.50% 6232338
chr10 7486018 5.60% 7486013
chr11 7732357 5.72% 7732343
chr12 6975371 5.23% 6975365
chr13 3926661 3.43% 3926660
chr14 4448278 4.16% 4448274
chr15 4677998 4.59% 4677994
chr16 4753310 5.26% 4753307
chr17 6269419 7.53% 6269413
chr18 3332618 4.15% 3332615
chr19 4678726 7.98% 4678723
chr20 3820978 5.93% 3820974
chr21 1738020 3.72% 1738017
chr22 2841551 5.59% 2841546
chrX 3429115 2.20% 3429114
chrY 60527 0.11% 60527
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 145413333 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c6__mean_pred_corrected.bw 1.07 GB 0a140572d6eff4e8489454533cbe7179
genomic_resource.yaml 1.27 KB a129b3fd3f6af6e32a744b44dca088aa
statistics/