Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c7/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Lung for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c7
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c7_mean_counts_contribs float

liu2026Multiomics_Lung_c7_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Lung_c7_mean_counts_contribs [-0.138, 0.232]
n
186,150,297
mean
0.000366
sd
0.00468

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1861502975.80% 185028084
chr1 17186405 6.90% 17082100
chr2 15218671 6.28% 15126781
chr3 12194327 6.15% 12119099
chr4 8908762 4.68% 8852788
chr5 10655939 5.87% 10591597
chr6 11255271 6.59% 11187167
chr7 9622026 6.04% 9562859
chr8 8557278 5.90% 8505594
chr9 8103095 5.86% 8055253
chr10 9428861 7.05% 9372708
chr11 9743037 7.21% 9685297
chr12 8878563 6.66% 8824891
chr13 5003742 4.38% 4972868
chr14 5714130 5.34% 5680430
chr15 6042158 5.92% 6005830
chr16 6094868 6.75% 6059529
chr17 7970993 9.57% 7924386
chr18 4388233 5.46% 4361362
chr19 6035298 10.30% 6001226
chr20 4827834 7.49% 4799363
chr21 2162592 4.63% 2149036
chr22 3368681 6.63% 3349289
chrX 4747714 3.04% 4719145
chrY 41819 0.07% 39486
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 185028084 1 2114 1.01 1
global segment-length histogram

Files

Filename Size md5
Lung_c7__mean_counts_contribs.bw 1.12 GB e51fdd3060693ef04e79e555ea68d075
genomic_resource.yaml 1.3 KB 65c7b67b4e245a4d893d97c9d166e975
statistics/