Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c7/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c7
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c7_mean_pred_corrected float

liu2026Multiomics_Lung_c7_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c7_mean_pred_corrected [0.000623, 28]
n
98,707,549
mean
0.201
sd
0.474

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 987075493.08% 98706579
chr1 9148496 3.67% 9148489
chr2 8042660 3.32% 8042657
chr3 6437633 3.25% 6437631
chr4 4680888 2.46% 4680885
chr5 5612702 3.09% 5612701
chr6 5972300 3.50% 5972296
chr7 5077947 3.19% 5077944
chr8 4503004 3.10% 4503004
chr9 4310830 3.11% 4310829
chr10 4996660 3.73% 4996657
chr11 5177683 3.83% 5177682
chr12 4732039 3.55% 4732035
chr13 2616131 2.29% 2616130
chr14 3039895 2.84% 3039893
chr15 3200199 3.14% 3200199
chr16 3246975 3.59% 3246972
chr17 4288227 5.15% 4288225
chr18 2303620 2.87% 2303618
chr19 3297396 5.63% 3297394
chr20 2551380 3.96% 2551379
chr21 1138257 2.44% 1138257
chr22 1788107 3.52% 1788105
chrX 2522091 1.62% 2522090
chrY 22429 0.04% 21507
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 98706579 1 911 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c7__mean_pred_corrected.bw 749.32 MB 7882d24bd63c218d3d7bde83fde6a877
genomic_resource.yaml 1.27 KB 50008c99aaea6da2011c127a4ea5a38a
statistics/