Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c9/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Lung for cell cluster c9 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Lung_c9_mean_counts_contribs | float |
liu2026Multiomics_Lung_c9_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0724, 0.231] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 247314264 | 7.71% | 245785389 |
| chr1 | 22733552 | 9.13% | 22594649 |
| chr2 | 20537159 | 8.48% | 20408673 |
| chr3 | 16590804 | 8.37% | 16486511 |
| chr4 | 12512006 | 6.58% | 12429672 |
| chr5 | 13831597 | 7.62% | 13744412 |
| chr6 | 14990285 | 8.78% | 14896952 |
| chr7 | 13028699 | 8.18% | 12947726 |
| chr8 | 11213898 | 7.73% | 11143960 |
| chr9 | 10707460 | 7.74% | 10641201 |
| chr10 | 12379502 | 9.25% | 12303726 |
| chr11 | 12831902 | 9.50% | 12754820 |
| chr12 | 11802728 | 8.86% | 11729566 |
| chr13 | 6894018 | 6.03% | 6849943 |
| chr14 | 7750818 | 7.24% | 7703381 |
| chr15 | 7890160 | 7.74% | 7841876 |
| chr16 | 7834008 | 8.67% | 7787495 |
| chr17 | 10133782 | 12.17% | 10074881 |
| chr18 | 5892248 | 7.33% | 5853673 |
| chr19 | 7532683 | 12.85% | 7490438 |
| chr20 | 6309132 | 9.79% | 6271516 |
| chr21 | 2929953 | 6.27% | 2911646 |
| chr22 | 4619925 | 9.09% | 4593459 |
| chrX | 6276438 | 4.02% | 6237158 |
| chrY | 91507 | 0.16% | 88055 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 245785389 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Lung_c9__mean_counts_contribs.bw | 1.49 GB | 28b667ce29e3c7694eb3922a708856f5 |
| genomic_resource.yaml | 1.3 KB | 056eb9529328e4e4e0ae455ee90371bc |
| statistics/ |
