Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Lung/c9/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Lung for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Lung_c9
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Lung
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Lung_c9_mean_pred_corrected float

liu2026Multiomics_Lung_c9_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Lung_c9_mean_pred_corrected [0.00123, 52.5]
n
133,077,609
mean
0.326
sd
0.818

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1330776094.15% 133076558
chr1 12296883 4.94% 12296870
chr2 10995135 4.54% 10995128
chr3 8873492 4.47% 8873484
chr4 6664600 3.50% 6664593
chr5 7375824 4.06% 7375820
chr6 8061910 4.72% 8061898
chr7 6988624 4.39% 6988616
chr8 5974011 4.12% 5974007
chr9 5762308 4.16% 5762305
chr10 6644793 4.97% 6644788
chr11 6935337 5.13% 6935331
chr12 6365927 4.78% 6365925
chr13 3663229 3.20% 3663225
chr14 4193136 3.92% 4193132
chr15 4248356 4.17% 4248351
chr16 4251374 4.71% 4251371
chr17 5565903 6.69% 5565902
chr18 3141266 3.91% 3141263
chr19 4185409 7.14% 4185406
chr20 3388469 5.26% 3388466
chr21 1582362 3.39% 1582361
chr22 2500378 4.92% 2500377
chrX 3365743 2.16% 3365741
chrY 53140 0.09% 52198
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 133076558 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Lung_c9__mean_pred_corrected.bw 1008.2 MB 2fd4481265ff257f9c04807536ec37fc
genomic_resource.yaml 1.27 KB a8dbba4c4f4556e3a3bc677695828870
statistics/