Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c0/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c0_mean_pred_corrected float

liu2026Multiomics_Muscle_c0_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c0_mean_pred_corrected [2.2e-05, 90.9]
n
141,297,637
mean
0.463
sd
1.22

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1412976374.40% 141296554
chr1 13290309 5.34% 13290301
chr2 11921309 4.92% 11921299
chr3 9211695 4.65% 9211684
chr4 6868267 3.61% 6868258
chr5 7554156 4.16% 7554153
chr6 8342609 4.88% 8342600
chr7 7229143 4.54% 7229136
chr8 6443541 4.44% 6443534
chr9 6247214 4.51% 6247209
chr10 7248373 5.42% 7248364
chr11 7354367 5.44% 7354362
chr12 6613595 4.96% 6613586
chr13 3670174 3.21% 3670171
chr14 4499790 4.20% 4499782
chr15 4605992 4.52% 4605988
chr16 4543935 5.03% 4543928
chr17 6161286 7.40% 6161280
chr18 2956460 3.68% 2956455
chr19 4597040 7.84% 4597032
chr20 3755619 5.83% 3755617
chr21 1727376 3.70% 1727375
chr22 2869814 5.65% 2869812
chrX 3556882 2.28% 3556879
chrY 28691 0.05% 27749
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 141296554 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c0__mean_pred_corrected.bw 1.04 GB 27548c8766ba9598e7940aafe7ae4063
genomic_resource.yaml 1.28 KB 6a95d6f2899e9616af59aeed7d377928
statistics/