Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c1/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c1_mean_pred_corrected float

liu2026Multiomics_Muscle_c1_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c1_mean_pred_corrected [1.82e-05, 97.3]
n
152,616,621
mean
0.513
sd
1.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1526166214.76% 152616492
chr1 14100823 5.66% 14100810
chr2 12886906 5.32% 12886892
chr3 10132898 5.11% 10132883
chr4 7431046 3.91% 7431042
chr5 8502138 4.68% 8502130
chr6 9365454 5.48% 9365450
chr7 7969307 5.00% 7969306
chr8 7151753 4.93% 7151748
chr9 6615756 4.78% 6615751
chr10 7777571 5.81% 7777565
chr11 7961800 5.89% 7961788
chr12 7363355 5.52% 7363348
chr13 4064857 3.55% 4064853
chr14 4708407 4.40% 4708406
chr15 4846927 4.75% 4846923
chr16 4886247 5.41% 4886240
chr17 6437360 7.73% 6437356
chr18 3411395 4.24% 3411391
chr19 4852669 8.28% 4852668
chr20 4002290 6.21% 4002285
chr21 1831698 3.92% 1831698
chr22 2898585 5.70% 2898584
chrX 3402140 2.18% 3402136
chrY 15239 0.03% 15239
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 152616492 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c1__mean_pred_corrected.bw 1.13 GB e7b6616c33cc8c1adbbe47a34dc7b1e3
genomic_resource.yaml 1.28 KB 7ee80d5309b67094373f2b84c85448c4
statistics/