Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c10/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c10
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c10_mean_pred_corrected float

liu2026Multiomics_Muscle_c10_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c10_mean_pred_corrected [0.00154, 5.55]
n
57,420,858
mean
0.066
sd
0.109

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 574208581.79% 57420836
chr1 5535052 2.22% 5535049
chr2 4699320 1.94% 4699318
chr3 3615404 1.82% 3615403
chr4 2642681 1.39% 2642681
chr5 2986838 1.65% 2986837
chr6 3443939 2.02% 3443938
chr7 2948683 1.85% 2948681
chr8 2499427 1.72% 2499425
chr9 2456252 1.77% 2456250
chr10 2844463 2.13% 2844463
chr11 3123406 2.31% 3123406
chr12 2790723 2.09% 2790722
chr13 1390078 1.22% 1390078
chr14 1797563 1.68% 1797563
chr15 1841895 1.81% 1841892
chr16 1896367 2.10% 1896366
chr17 2660405 3.20% 2660405
chr18 1137002 1.41% 1137001
chr19 2387535 4.07% 2387534
chr20 1512272 2.35% 1512272
chr21 653625 1.40% 653625
chr22 1156836 2.28% 1156836
chrX 1388482 0.89% 1388481
chrY 12610 0.02% 12610
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 57420836 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c10__mean_pred_corrected.bw 434.91 MB 054210fab7ea8f5dc01d462954d03bc8
genomic_resource.yaml 1.28 KB f4b59465ecb1f338c458a85f9a83bc7c
statistics/