Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c11/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c11
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c11_mean_pred_corrected float

liu2026Multiomics_Muscle_c11_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Muscle_c11_mean_pred_corrected [0.000696, 4.84]
n
50,801,265
mean
0.0506
sd
0.0895

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 508012651.58% 50801234
chr1 4875784 1.96% 4875782
chr2 3943142 1.63% 3943137
chr3 3271398 1.65% 3271398
chr4 2310336 1.21% 2310335
chr5 2669789 1.47% 2669788
chr6 3017882 1.77% 3017879
chr7 2609056 1.64% 2609055
chr8 2169907 1.50% 2169905
chr9 2189130 1.58% 2189129
chr10 2346056 1.75% 2346056
chr11 2788715 2.06% 2788714
chr12 2499375 1.88% 2499373
chr13 1251664 1.09% 1251661
chr14 1560852 1.46% 1560851
chr15 1618215 1.59% 1618212
chr16 1812723 2.01% 1812722
chr17 2422784 2.91% 2422784
chr18 1065599 1.33% 1065598
chr19 2236758 3.82% 2236757
chr20 1324915 2.06% 1324915
chr21 564394 1.21% 564393
chr22 1058921 2.08% 1058920
chrX 1193870 0.77% 1193870
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50801234 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c11__mean_pred_corrected.bw 385.26 MB 615ce5422b6b9f69fec7d615bf515581
genomic_resource.yaml 1.28 KB f31505d808d0473617a6b68c0b63dc00
statistics/