Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c12/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c12
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c12_mean_pred_corrected float

liu2026Multiomics_Muscle_c12_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c12_mean_pred_corrected [0.000939, 2.33]
n
26,792,137
mean
0.0412
sd
0.0559

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 267921370.83% 26792126
chr1 2655729 1.07% 2655728
chr2 2001834 0.83% 2001834
chr3 1638181 0.83% 1638181
chr4 1005092 0.53% 1005092
chr5 1368391 0.75% 1368391
chr6 1541630 0.90% 1541630
chr7 1294975 0.81% 1294972
chr8 1059032 0.73% 1059032
chr9 1173626 0.85% 1173626
chr10 1262589 0.94% 1262587
chr11 1493829 1.11% 1493828
chr12 1333543 1.00% 1333542
chr13 557623 0.49% 557621
chr14 865116 0.81% 865115
chr15 863458 0.85% 863458
chr16 988657 1.09% 988657
chr17 1461261 1.76% 1461261
chr18 475642 0.59% 475642
chr19 1615149 2.76% 1615149
chr20 708501 1.10% 708501
chr21 272878 0.58% 272878
chr22 556704 1.10% 556704
chrX 592277 0.38% 592277
chrY 6420 0.01% 6420
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26792126 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c12__mean_pred_corrected.bw 203.29 MB e2dfda6bd03b37b72d9f3dcb68d4e361
genomic_resource.yaml 1.28 KB 15182d8adfd55730cba3ad81c09685ae
statistics/