Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c13/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c13_mean_pred_corrected float

liu2026Multiomics_Muscle_c13_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c13_mean_pred_corrected [0.00294, 18.1]
n
80,436,680
mean
0.129
sd
0.267

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 804366802.51% 80436648
chr1 7697487 3.09% 7697483
chr2 6487908 2.68% 6487905
chr3 5110108 2.58% 5110108
chr4 3658452 1.92% 3658452
chr5 4354541 2.40% 4354540
chr6 5003758 2.93% 5003755
chr7 3979544 2.50% 3979543
chr8 3609294 2.49% 3609290
chr9 3588845 2.59% 3588844
chr10 3913870 2.93% 3913869
chr11 4239618 3.14% 4239614
chr12 3946408 2.96% 3946404
chr13 1880677 1.64% 1880676
chr14 2522047 2.36% 2522045
chr15 2636318 2.58% 2636317
chr16 2729941 3.02% 2729941
chr17 3681867 4.42% 3681867
chr18 1652413 2.06% 1652413
chr19 3220785 5.49% 3220785
chr20 2179759 3.38% 2179758
chr21 973622 2.08% 973622
chr22 1644045 3.24% 1644044
chrX 1713813 1.10% 1713813
chrY 11560 0.02% 11560
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 80436648 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c13__mean_pred_corrected.bw 609.54 MB a564ccbe3a76424ff7bf2c181623a3df
genomic_resource.yaml 1.28 KB b2a65a62f1fbe2e9784695206f4f5d6d
statistics/