Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c14/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c14
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c14
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c14_mean_pred_corrected float

liu2026Multiomics_Muscle_c14_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c14_mean_pred_corrected [0.000974, 6.83]
n
64,588,896
mean
0.0701
sd
0.126

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 645888962.01% 64588877
chr1 6159967 2.47% 6159964
chr2 5279516 2.18% 5279514
chr3 4052763 2.04% 4052763
chr4 2840855 1.49% 2840854
chr5 3462353 1.91% 3462351
chr6 3940605 2.31% 3940605
chr7 3221533 2.02% 3221531
chr8 3024142 2.08% 3024141
chr9 2800155 2.02% 2800155
chr10 3270468 2.44% 3270467
chr11 3514802 2.60% 3514801
chr12 3216310 2.41% 3216310
chr13 1592248 1.39% 1592248
chr14 2038656 1.90% 2038656
chr15 2111364 2.07% 2111363
chr16 2155038 2.39% 2155037
chr17 2907104 3.49% 2907104
chr18 1257132 1.56% 1257131
chr19 2521897 4.30% 2521897
chr20 1687709 2.62% 1687708
chr21 701305 1.50% 701304
chr22 1228746 2.42% 1228746
chrX 1596228 1.02% 1596227
chrY 8000 0.01% 8000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 64588877 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c14__mean_pred_corrected.bw 489.71 MB 8a9fc658e2ec2702992c35195bc14a02
genomic_resource.yaml 1.28 KB 958e89c0acb37e34aae6029179768fa9
statistics/