Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c15/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c15
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c15_mean_pred_corrected float

liu2026Multiomics_Muscle_c15_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c15_mean_pred_corrected [0.00121, 12.5]
n
66,148,590
mean
0.0997
sd
0.211

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 661485902.06% 66148556
chr1 6397584 2.57% 6397581
chr2 5289376 2.18% 5289375
chr3 4182727 2.11% 4182724
chr4 2842234 1.49% 2842233
chr5 3460879 1.91% 3460879
chr6 3950283 2.31% 3950282
chr7 3301728 2.07% 3301726
chr8 2883383 1.99% 2883378
chr9 2889598 2.09% 2889598
chr10 3343399 2.50% 3343398
chr11 3521850 2.61% 3521849
chr12 3274706 2.46% 3274703
chr13 1562257 1.37% 1562255
chr14 2142401 2.00% 2142399
chr15 2168250 2.13% 2168249
chr16 2232436 2.47% 2232435
chr17 3203463 3.85% 3203462
chr18 1245421 1.55% 1245421
chr19 2831391 4.83% 2831389
chr20 1790570 2.78% 1790570
chr21 774262 1.66% 774261
chr22 1334391 2.63% 1334390
chrX 1524001 0.98% 1523999
chrY 2000 <0.01% 2000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66148556 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c15__mean_pred_corrected.bw 501.8 MB 7e18f844bb26b9057f2bb102a47188d7
genomic_resource.yaml 1.28 KB 21af242971a48420423af0cc33fbaaf9
statistics/