Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c16/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c16
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c16
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c16_mean_pred_corrected float

liu2026Multiomics_Muscle_c16_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c16_mean_pred_corrected [0.00187, 10.8]
n
69,399,087
mean
0.0782
sd
0.15

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 693990872.16% 69399074
chr1 6759030 2.71% 6759029
chr2 5681931 2.35% 5681930
chr3 4461762 2.25% 4461762
chr4 3106355 1.63% 3106354
chr5 3460625 1.91% 3460625
chr6 4067164 2.38% 4067161
chr7 3567820 2.24% 3567820
chr8 3067541 2.11% 3067540
chr9 3084867 2.23% 3084867
chr10 3388192 2.53% 3388191
chr11 3757255 2.78% 3757255
chr12 3328142 2.50% 3328142
chr13 1669555 1.46% 1669553
chr14 2198275 2.05% 2198274
chr15 2303153 2.26% 2303151
chr16 2296737 2.54% 2296737
chr17 3232566 3.88% 3232566
chr18 1382827 1.72% 1382827
chr19 2798558 4.77% 2798558
chr20 1802137 2.80% 1802137
chr21 789634 1.69% 789634
chr22 1429497 2.81% 1429497
chrX 1752365 1.12% 1752365
chrY 13099 0.02% 13099
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 69399074 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c16__mean_pred_corrected.bw 526.07 MB 3bc6190d52c5f5c0f19793ca3c4e3b74
genomic_resource.yaml 1.28 KB 8aa7b5ed8b6b4a13271ac06263308d7c
statistics/