Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c17/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c17
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c17
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c17_mean_pred_corrected float

liu2026Multiomics_Muscle_c17_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Muscle_c17_mean_pred_corrected [0.00103, 2.31]
n
29,868,179
mean
0.0482
sd
0.0598

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 298681790.93% 29868159
chr1 3019141 1.21% 3019141
chr2 2301067 0.95% 2301065
chr3 1835211 0.93% 1835211
chr4 1236151 0.65% 1236151
chr5 1438503 0.79% 1438502
chr6 1786788 1.05% 1786788
chr7 1490853 0.94% 1490853
chr8 1267349 0.87% 1267347
chr9 1276391 0.92% 1276388
chr10 1390008 1.04% 1390008
chr11 1669368 1.24% 1669361
chr12 1484932 1.11% 1484931
chr13 634654 0.55% 634654
chr14 981774 0.92% 981774
chr15 936833 0.92% 936833
chr16 1069733 1.18% 1069733
chr17 1533143 1.84% 1533141
chr18 550833 0.69% 550833
chr19 1598233 2.73% 1598233
chr20 767884 1.19% 767884
chr21 300472 0.64% 300471
chr22 629562 1.24% 629562
chrX 653952 0.42% 653951
chrY 15344 0.03% 15344
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29868159 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c17__mean_pred_corrected.bw 226.31 MB 7e9ab0e7040e256e11869499db1db9bd
genomic_resource.yaml 1.28 KB 40efa999e72aad8949fa22226df53056
statistics/