Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c18/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c18
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c18
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c18_mean_pred_corrected float

liu2026Multiomics_Muscle_c18_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c18_mean_pred_corrected [0.00101, 6.39]
n
59,955,133
mean
0.0717
sd
0.131

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 599551331.87% 59955116
chr1 5836117 2.34% 5836116
chr2 4868830 2.01% 4868828
chr3 3884580 1.96% 3884580
chr4 2733806 1.44% 2733804
chr5 3058795 1.68% 3058794
chr6 3578224 2.09% 3578224
chr7 3027585 1.90% 3027584
chr8 2625967 1.81% 2625966
chr9 2617793 1.89% 2617793
chr10 2980263 2.23% 2980261
chr11 3244484 2.40% 3244484
chr12 3006100 2.26% 3006100
chr13 1441731 1.26% 1441730
chr14 1929650 1.80% 1929650
chr15 1940554 1.90% 1940553
chr16 2006887 2.22% 2006886
chr17 2783622 3.34% 2783622
chr18 1173635 1.46% 1173635
chr19 2388889 4.08% 2388889
chr20 1513636 2.35% 1513636
chr21 649617 1.39% 649617
chr22 1188819 2.34% 1188818
chrX 1474549 0.94% 1474546
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 59955116 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c18__mean_pred_corrected.bw 454.45 MB a904cd6d74b6949c441859a7e9444c40
genomic_resource.yaml 1.28 KB 04c6ea82d7d2ab200d13a267d7ec20ff
statistics/