Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c19/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c19
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c19
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c19_mean_pred_corrected float

liu2026Multiomics_Muscle_c19_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Muscle_c19_mean_pred_corrected [0.000544, 2.12]
n
47,490,144
mean
0.0299
sd
0.0474

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 474901441.48% 47490135
chr1 4350897 1.75% 4350895
chr2 3872347 1.60% 3872344
chr3 3072245 1.55% 3072245
chr4 2293049 1.21% 2293048
chr5 2669987 1.47% 2669987
chr6 2812123 1.65% 2812122
chr7 2512970 1.58% 2512969
chr8 2176858 1.50% 2176858
chr9 1985122 1.43% 1985122
chr10 2321780 1.74% 2321780
chr11 2567383 1.90% 2567383
chr12 2299451 1.73% 2299450
chr13 1207358 1.06% 1207358
chr14 1439493 1.34% 1439493
chr15 1540155 1.51% 1540155
chr16 1562104 1.73% 1562104
chr17 2089304 2.51% 2089304
chr18 1004480 1.25% 1004480
chr19 1921171 3.28% 1921171
chr20 1227331 1.90% 1227331
chr21 518045 1.11% 518045
chr22 833358 1.64% 833358
chrX 1213133 0.78% 1213133
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47490135 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c19__mean_pred_corrected.bw 360.48 MB d8613ab117151c16a184c24403ac0698
genomic_resource.yaml 1.28 KB 413fbf4610a8bc90298c278d16c9d5b4
statistics/