Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c2/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c2_mean_pred_corrected float

liu2026Multiomics_Muscle_c2_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c2_mean_pred_corrected [0.00298, 25.1]
n
87,515,353
mean
0.181
sd
0.401

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 875153532.73% 87515324
chr1 8517094 3.42% 8517092
chr2 7195991 2.97% 7195988
chr3 5575060 2.81% 5575058
chr4 3963318 2.08% 3963318
chr5 4566868 2.52% 4566865
chr6 5234224 3.06% 5234222
chr7 4362274 2.74% 4362273
chr8 3865773 2.66% 3865773
chr9 3870692 2.80% 3870692
chr10 4462788 3.34% 4462787
chr11 4751701 3.52% 4751700
chr12 4247200 3.19% 4247198
chr13 2125906 1.86% 2125904
chr14 2756277 2.57% 2756277
chr15 2853273 2.80% 2853271
chr16 2893943 3.20% 2893942
chr17 4025263 4.83% 4025263
chr18 1757117 2.19% 1757115
chr19 3370760 5.75% 3370758
chr20 2326060 3.61% 2326059
chr21 993232 2.13% 993232
chr22 1812331 3.57% 1812331
chrX 1967032 1.26% 1967030
chrY 21176 0.04% 21176
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 87515324 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c2__mean_pred_corrected.bw 661.94 MB 77f0c069a756d63eb97f3e1672f4f46e
genomic_resource.yaml 1.28 KB 35ddb9fcb76dd8054f681352cc9202c8
statistics/