Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c20/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c20
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c20
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c20_mean_pred_corrected float

liu2026Multiomics_Muscle_c20_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c20_mean_pred_corrected [0.000832, 3.67]
n
37,694,478
mean
0.0499
sd
0.0675

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 376944781.17% 37694470
chr1 3754809 1.51% 3754808
chr2 2891839 1.19% 2891838
chr3 2330064 1.18% 2330064
chr4 1638901 0.86% 1638900
chr5 1901279 1.05% 1901278
chr6 2261534 1.32% 2261534
chr7 1872772 1.18% 1872772
chr8 1584343 1.09% 1584343
chr9 1637388 1.18% 1637388
chr10 1763962 1.32% 1763962
chr11 2116847 1.57% 2116844
chr12 1904605 1.43% 1904605
chr13 834794 0.73% 834794
chr14 1199315 1.12% 1199314
chr15 1177285 1.15% 1177285
chr16 1324743 1.47% 1324743
chr17 1825277 2.19% 1825277
chr18 737569 0.92% 737569
chr19 1973095 3.37% 1973095
chr20 947590 1.47% 947590
chr21 441664 0.95% 441664
chr22 775392 1.53% 775392
chrX 775416 0.50% 775416
chrY 23995 0.04% 23995
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37694470 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c20__mean_pred_corrected.bw 285.45 MB 8abfef2164009992556b958e27bb8779
genomic_resource.yaml 1.28 KB 93a27d36f35a4b0e2f83da305c8f17bc
statistics/