Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c21/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c21
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c21
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c21_mean_pred_corrected float

liu2026Multiomics_Muscle_c21_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c21_mean_pred_corrected [0.000995, 2.91]
n
47,297,448
mean
0.0357
sd
0.0619

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 472974481.47% 47297432
chr1 4466918 1.79% 4466915
chr2 3821910 1.58% 3821910
chr3 3165801 1.60% 3165800
chr4 2257688 1.19% 2257688
chr5 2575713 1.42% 2575713
chr6 2861060 1.68% 2861059
chr7 2410640 1.51% 2410639
chr8 2174333 1.50% 2174333
chr9 1987521 1.44% 1987520
chr10 2198474 1.64% 2198474
chr11 2503045 1.85% 2503044
chr12 2360047 1.77% 2360044
chr13 1186955 1.04% 1186954
chr14 1494602 1.40% 1494601
chr15 1503638 1.47% 1503638
chr16 1617834 1.79% 1617834
chr17 2070933 2.49% 2070932
chr18 1024114 1.27% 1024114
chr19 1873395 3.20% 1873395
chr20 1209545 1.88% 1209544
chr21 507936 1.09% 507936
chr22 848084 1.67% 848084
chrX 1164224 0.75% 1164223
chrY 13038 0.02% 13038
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47297432 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c21__mean_pred_corrected.bw 358.95 MB 6c000ef972a66b4b0b475550857eddf5
genomic_resource.yaml 1.28 KB 23d57e013a440b27c2e101f1bd4e365f
statistics/