Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c3/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c3
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c3_mean_pred_corrected float

liu2026Multiomics_Muscle_c3_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c3_mean_pred_corrected [0.000946, 44.1]
n
102,728,770
mean
0.251
sd
0.562

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1027287703.20% 102728717
chr1 9460013 3.80% 9460009
chr2 8592254 3.55% 8592251
chr3 6857581 3.46% 6857575
chr4 4946175 2.60% 4946171
chr5 5989224 3.30% 5989218
chr6 6240073 3.65% 6240068
chr7 5238562 3.29% 5238560
chr8 4838603 3.33% 4838600
chr9 4594844 3.32% 4594843
chr10 5332947 3.99% 5332944
chr11 5239621 3.88% 5239619
chr12 4954396 3.72% 4954394
chr13 2684161 2.35% 2684160
chr14 3230759 3.02% 3230757
chr15 3315990 3.25% 3315988
chr16 3149898 3.49% 3149898
chr17 4273391 5.13% 4273389
chr18 2273400 2.83% 2273399
chr19 3281213 5.60% 3281212
chr20 2836962 4.40% 2836961
chr21 1227036 2.63% 1227035
chr22 1757007 3.46% 1757007
chrX 2392267 1.53% 2392266
chrY 22393 0.04% 22393
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 102728717 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c3__mean_pred_corrected.bw 778.33 MB 8cdc1f26083c342a392644f17776a371
genomic_resource.yaml 1.28 KB 1c3a04ad4bc453d1b2988c2631bf6206
statistics/