Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c4/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c4
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c4_mean_pred_corrected float

liu2026Multiomics_Muscle_c4_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c4_mean_pred_corrected [0.00217, 21.7]
n
90,875,375
mean
0.171
sd
0.357

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 908753752.83% 90875338
chr1 8256446 3.32% 8256444
chr2 7567379 3.12% 7567377
chr3 6031056 3.04% 6031054
chr4 4466288 2.35% 4466283
chr5 5232431 2.88% 5232428
chr6 5641526 3.30% 5641522
chr7 4581453 2.88% 4581452
chr8 4403916 3.03% 4403915
chr9 3939458 2.85% 3939455
chr10 4661809 3.48% 4661808
chr11 4654248 3.45% 4654245
chr12 4413461 3.31% 4413460
chr13 2504692 2.19% 2504690
chr14 2901475 2.71% 2901473
chr15 2888030 2.83% 2888028
chr16 2708550 3.00% 2708550
chr17 3640172 4.37% 3640171
chr18 1999641 2.49% 1999641
chr19 2969592 5.07% 2969591
chr20 2253974 3.50% 2253974
chr21 1071631 2.29% 1071631
chr22 1540012 3.03% 1540012
chrX 2539149 1.63% 2539148
chrY 8986 0.02% 8986
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90875338 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c4__mean_pred_corrected.bw 688.81 MB ee32b7389a52c4c750bd1116a6935ede
genomic_resource.yaml 1.28 KB 48447c074e85e77fe22dc6ab2f3d7928
statistics/