Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c5/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c5_mean_pred_corrected float

liu2026Multiomics_Muscle_c5_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c5_mean_pred_corrected [0.00291, 56.2]
n
117,431,343
mean
0.271
sd
0.696

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1174313433.66% 117431291
chr1 11087094 4.45% 11087088
chr2 9775558 4.04% 9775555
chr3 7539070 3.80% 7539067
chr4 5600096 2.94% 5600092
chr5 6355171 3.50% 6355168
chr6 7028859 4.12% 7028856
chr7 5997481 3.76% 5997478
chr8 5304816 3.65% 5304816
chr9 5112962 3.69% 5112961
chr10 5895139 4.41% 5895137
chr11 6208498 4.60% 6208496
chr12 5719715 4.29% 5719712
chr13 3052823 2.67% 3052819
chr14 3686953 3.44% 3686950
chr15 3731230 3.66% 3731229
chr16 3843940 4.26% 3843939
chr17 5215543 6.26% 5215542
chr18 2533425 3.15% 2533425
chr19 3997856 6.82% 3997854
chr20 3196218 4.96% 3196216
chr21 1386388 2.97% 1386387
chr22 2307891 4.54% 2307891
chrX 2832590 1.82% 2832586
chrY 22027 0.04% 22027
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 117431291 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c5__mean_pred_corrected.bw 888.1 MB 782035622260dcb50a98efdd98486266
genomic_resource.yaml 1.28 KB a7835ae4ef8e83f76bb30b779dcdc313
statistics/