Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c6/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Muscle for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c6
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c6_mean_counts_contribs float

liu2026Multiomics_Muscle_c6_mean_counts_contribs
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
 HISTOGRAM FOR liu2026Multiomics_Muscle_c6_mean_counts_contribs [-0.0573, 0.223]
n
271,264,329
mean
0.000245
sd
0.00354

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2712643298.45% 269179580
chr1 24398340 9.80% 24213809
chr2 22942830 9.47% 22764171
chr3 18147536 9.15% 18005088
chr4 14119191 7.42% 14003729
chr5 15454148 8.51% 15332051
chr6 16213402 9.49% 16087231
chr7 14460938 9.08% 14348058
chr8 12918459 8.90% 12816959
chr9 11609123 8.39% 11520373
chr10 13478392 10.07% 13374940
chr11 14079207 10.42% 13973565
chr12 13062389 9.80% 12961330
chr13 7775320 6.80% 7712892
chr14 8482334 7.92% 8417246
chr15 8380221 8.22% 8317038
chr16 8519673 9.43% 8457464
chr17 10587354 12.72% 10510992
chr18 6716411 8.36% 6663982
chr19 7921369 13.51% 7867115
chr20 7031860 10.91% 6979419
chr21 3188931 6.83% 3163455
chr22 4781917 9.41% 4747895
chrX 6992870 4.48% 6938673
chrY 2114 <0.01% 2105
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 269179580 1 849 1.01 1
global segment-length histogram

Files

Filename Size md5
Muscle_c6__mean_counts_contribs.bw 1.63 GB cf74a912ebc4adf1d18a961464ec3c83
genomic_resource.yaml 1.31 KB 62a3c3a952ab3c0afd5d7c37f033d3dc
statistics/