Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c6/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c6_mean_pred_corrected float

liu2026Multiomics_Muscle_c6_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c6_mean_pred_corrected [0.00421, 52.2]
n
144,014,679
mean
0.267
sd
0.656

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1440146794.49% 144014568
chr1 13043247 5.24% 13043239
chr2 12126225 5.01% 12126217
chr3 9607871 4.85% 9607865
chr4 7411875 3.90% 7411873
chr5 8145877 4.49% 8145870
chr6 8615137 5.04% 8615131
chr7 7644794 4.80% 7644787
chr8 6810372 4.69% 6810367
chr9 6176064 4.46% 6176060
chr10 7120249 5.32% 7120241
chr11 7512312 5.56% 7512300
chr12 6935791 5.20% 6935786
chr13 4093972 3.58% 4093970
chr14 4515893 4.22% 4515889
chr15 4455109 4.37% 4455105
chr16 4547425 5.03% 4547423
chr17 5713417 6.86% 5713411
chr18 3530430 4.39% 3530428
chr19 4337553 7.40% 4337549
chr20 3721011 5.77% 3721008
chr21 1696537 3.63% 1696535
chr22 2562220 5.04% 2562219
chrX 3690298 2.36% 3690295
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 144014568 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c6__mean_pred_corrected.bw 1.06 GB fc5c2b8f4f1c25be921a08943d04497a
genomic_resource.yaml 1.28 KB d6eaf3f23a4663d52e7fa4c4234cb96e
statistics/