Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c7/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Muscle for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c7
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c7_mean_counts_contribs float

liu2026Multiomics_Muscle_c7_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Muscle_c7_mean_counts_contribs [-0.121, 0.24]
n
184,590,685
mean
0.000371
sd
0.0046

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1845906855.75% 183456216
chr1 17208657 6.91% 17102117
chr2 15341291 6.33% 15246334
chr3 11987377 6.05% 11912655
chr4 9018493 4.74% 8960410
chr5 10123452 5.58% 10060409
chr6 10932523 6.40% 10865253
chr7 9466833 5.94% 9407221
chr8 8525015 5.87% 8472106
chr9 8223033 5.94% 8172946
chr10 9535228 7.13% 9477764
chr11 9738541 7.21% 9680412
chr12 8853842 6.64% 8799297
chr13 4820968 4.22% 4790698
chr14 5798329 5.42% 5763195
chr15 5860138 5.75% 5824526
chr16 5856515 6.48% 5820981
chr17 7861386 9.44% 7814888
chr18 3865929 4.81% 3841321
chr19 6106892 10.42% 6071824
chr20 4859443 7.54% 4830136
chr21 2202537 4.72% 2188506
chr22 3551318 6.99% 3530385
chrX 4826770 3.09% 4796813
chrY 26175 0.05% 26019
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 183456216 1 994 1.01 1
global segment-length histogram

Files

Filename Size md5
Muscle_c7__mean_counts_contribs.bw 1.11 GB 27c338e229de33239d73e7cdc9850a1a
genomic_resource.yaml 1.31 KB a6ef2dc929a1c4837faaa954d43ee479
statistics/