Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c7/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c7
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c7
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c7_mean_pred_corrected float

liu2026Multiomics_Muscle_c7_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c7_mean_pred_corrected [0.00134, 25.1]
n
97,856,519
mean
0.166
sd
0.372

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 978565193.05% 97856489
chr1 9146174 3.67% 9146171
chr2 8100534 3.34% 8100533
chr3 6326451 3.19% 6326447
chr4 4751532 2.50% 4751531
chr5 5335393 2.94% 5335392
chr6 5820553 3.41% 5820551
chr7 4980047 3.13% 4980046
chr8 4492387 3.10% 4492385
chr9 4367804 3.16% 4367804
chr10 5058077 3.78% 5058077
chr11 5185618 3.84% 5185614
chr12 4710230 3.53% 4710229
chr13 2532063 2.21% 2532062
chr14 3084661 2.88% 3084661
chr15 3105648 3.05% 3105648
chr16 3104692 3.44% 3104689
chr17 4229227 5.08% 4229225
chr18 2033171 2.53% 2033171
chr19 3313844 5.65% 3313844
chr20 2559861 3.97% 2559860
chr21 1165553 2.50% 1165553
chr22 1875195 3.69% 1875195
chrX 2564131 1.64% 2564128
chrY 13673 0.02% 13673
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 97856489 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c7__mean_pred_corrected.bw 741.92 MB 0a012ba60a6db0234e5f825f2ebde193
genomic_resource.yaml 1.28 KB 4de78924e1d6a51bf30a2674112bbe88
statistics/