Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c8/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Muscle for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c8
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c8_mean_counts_contribs float

liu2026Multiomics_Muscle_c8_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Muscle_c8_mean_counts_contribs [-0.0835, 0.286]
n
195,623,380
mean
0.000262
sd
0.00433

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1956233806.10% 194265432
chr1 17938977 7.21% 17815780
chr2 15917528 6.57% 15805139
chr3 13182251 6.65% 13089332
chr4 10064525 5.29% 9991200
chr5 10626293 5.85% 10550466
chr6 11776765 6.89% 11693886
chr7 10381559 6.52% 10308661
chr8 8930484 6.15% 8867402
chr9 8350618 6.03% 8292476
chr10 9542273 7.13% 9476301
chr11 10211157 7.56% 10141830
chr12 9252912 6.94% 9188069
chr13 5426306 4.74% 5387354
chr14 6415697 5.99% 6371521
chr15 6189083 6.07% 6146640
chr16 6180225 6.84% 6139454
chr17 7967410 9.57% 7915508
chr18 4478877 5.57% 4447439
chr19 6414672 10.94% 6373939
chr20 5006563 7.77% 4972187
chr21 2220640 4.75% 2204632
chr22 3629156 7.14% 3605727
chrX 5519409 3.54% 5480489
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 194265432 1 942 1.01 1
global segment-length histogram

Files

Filename Size md5
Muscle_c8__mean_counts_contribs.bw 1.18 GB 91d4623edb3e2bf7c6904e91b662864f
genomic_resource.yaml 1.31 KB 2535869e9398d8ac8117214eab4c7355
statistics/