Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c8/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c8
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c8
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c8_mean_pred_corrected float

liu2026Multiomics_Muscle_c8_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Muscle_c8_mean_pred_corrected [0.00126, 12.5]
n
100,883,628
mean
0.123
sd
0.253

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1008836283.14% 100883577
chr1 9304725 3.74% 9304719
chr2 8175583 3.38% 8175581
chr3 6774905 3.42% 6774898
chr4 5152528 2.71% 5152527
chr5 5425475 2.99% 5425474
chr6 6079823 3.56% 6079821
chr7 5328212 3.34% 5328206
chr8 4564793 3.15% 4564788
chr9 4292520 3.10% 4292519
chr10 4907897 3.67% 4907893
chr11 5288134 3.91% 5288133
chr12 4781469 3.59% 4781468
chr13 2773906 2.43% 2773906
chr14 3316364 3.10% 3316363
chr15 3185882 3.12% 3185880
chr16 3208236 3.55% 3208235
chr17 4184975 5.03% 4184974
chr18 2288539 2.85% 2288539
chr19 3407300 5.81% 3407298
chr20 2580848 4.00% 2580844
chr21 1153443 2.47% 1153442
chr22 1880542 3.70% 1880542
chrX 2827529 1.81% 2827527
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 100883577 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c8__mean_pred_corrected.bw 766.28 MB a5084082eacd29a4d42449540a5b69fd
genomic_resource.yaml 1.28 KB 2480c7bb4227d74a662e067c9861899c
statistics/