Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c9/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Muscle for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c9
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c9_mean_counts_contribs float

liu2026Multiomics_Muscle_c9_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Muscle_c9_mean_counts_contribs [-0.0775, 0.165]
n
193,378,805
mean
0.000321
sd
0.00382

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1933788056.03% 192102017
chr1 17680010 7.10% 17563271
chr2 15978449 6.60% 15872872
chr3 12698322 6.40% 12612739
chr4 10018090 5.27% 9948445
chr5 10945414 6.03% 10872325
chr6 12069367 7.07% 11989706
chr7 10259738 6.44% 10190738
chr8 9090862 6.26% 9030464
chr9 8351806 6.03% 8296679
chr10 9950780 7.44% 9885771
chr11 10034548 7.43% 9969832
chr12 9271884 6.96% 9211330
chr13 5168898 4.52% 5133759
chr14 6112919 5.71% 6073266
chr15 6230531 6.11% 6188835
chr16 5946651 6.58% 5908864
chr17 7762970 9.32% 7713154
chr18 4254243 5.29% 4224442
chr19 5880193 10.03% 5844324
chr20 4886221 7.58% 4854756
chr21 2281948 4.89% 2266683
chr22 3398214 6.69% 3376680
chrX 5106747 3.27% 5073082
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 192102017 1 984 1.01 1
global segment-length histogram

Files

Filename Size md5
Muscle_c9__mean_counts_contribs.bw 1.16 GB 6d84d531467ca1aa42ed8df745011f5e
genomic_resource.yaml 1.31 KB f20203d5f037d4cfbde1be7b2afbe6e9
statistics/