Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Muscle/c9/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Muscle for cell cluster c9
Description
Labels
  • assay: SHARE-seq
  • cluster: Muscle_c9
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Muscle
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Muscle_c9_mean_pred_corrected float

liu2026Multiomics_Muscle_c9_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Muscle_c9_mean_pred_corrected [0.000432, 33.1]
n
103,164,167
mean
0.182
sd
0.415

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1031641673.21% 103164109
chr1 9470675 3.80% 9470667
chr2 8497503 3.51% 8497499
chr3 6735302 3.40% 6735299
chr4 5320856 2.80% 5320852
chr5 5813860 3.20% 5813858
chr6 6450109 3.78% 6450102
chr7 5447050 3.42% 5447048
chr8 4810117 3.31% 4810111
chr9 4462456 3.22% 4462454
chr10 5321253 3.98% 5321249
chr11 5368001 3.97% 5367999
chr12 4956163 3.72% 4956162
chr13 2736346 2.39% 2736344
chr14 3273070 3.06% 3273070
chr15 3305109 3.24% 3305109
chr16 3171964 3.51% 3171964
chr17 4195490 5.04% 4195486
chr18 2259397 2.81% 2259395
chr19 3209137 5.47% 3209134
chr20 2602716 4.04% 2602716
chr21 1216341 2.60% 1216341
chr22 1813771 3.57% 1813770
chrX 2727481 1.75% 2727480
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 103164109 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Muscle_c9__mean_pred_corrected.bw 781.02 MB 5095c9cae9532966e3cc9af2080e6d08
genomic_resource.yaml 1.28 KB 20188a0796a1fcbe660e59e5a718c446
statistics/