Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c0/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c0
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c0_mean_counts_contribs float

liu2026Multiomics_Skin_c0_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c0_mean_counts_contribs [-0.172, 0.232]
n
277,361,235
mean
0.000516
sd
0.00486

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2773612358.64% 275740857
chr1 24465631 9.83% 24321722
chr2 23871252 9.86% 23732878
chr3 18766882 9.46% 18657100
chr4 14536720 7.64% 14448784
chr5 17070417 9.40% 16970509
chr6 17074131 10.00% 16975102
chr7 14419892 9.05% 14335113
chr8 13382661 9.22% 13303890
chr9 12272810 8.87% 12201344
chr10 14582118 10.90% 14497396
chr11 13595737 10.06% 13516221
chr12 12972681 9.73% 12896896
chr13 8092171 7.08% 8044641
chr14 8797787 8.22% 8746806
chr15 8858991 8.69% 8807216
chr16 8082708 8.95% 8036157
chr17 10204611 12.26% 10146346
chr18 6666773 8.29% 6626872
chr19 7157677 12.21% 7117085
chr20 7440722 11.55% 7398123
chr21 3409570 7.30% 3389979
chr22 4244823 8.35% 4220254
chrX 7394470 4.74% 7350423
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 275740857 1 973 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c0__mean_counts_contribs.bw 1.67 GB 3a8536051306ef1f3a0ac039c7a8d01c
genomic_resource.yaml 1.3 KB 84677c377b36eb8011a66c9d7a295aa2
statistics/