Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c0/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c0
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c0
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c0_mean_pred_corrected float

liu2026Multiomics_Skin_c0_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c0_mean_pred_corrected [0.00343, 51.1]
n
148,801,989
mean
0.333
sd
0.781

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1488019894.64% 148801863
chr1 13170715 5.29% 13170702
chr2 12779999 5.28% 12779992
chr3 10041408 5.06% 10041396
chr4 7745072 4.07% 7745063
chr5 9149541 5.04% 9149534
chr6 9151759 5.36% 9151750
chr7 7711522 4.84% 7711516
chr8 7122569 4.91% 7122561
chr9 6605562 4.77% 6605557
chr10 7824773 5.85% 7824765
chr11 7309123 5.41% 7309119
chr12 6966282 5.23% 6966278
chr13 4288115 3.75% 4288113
chr14 4712736 4.40% 4712729
chr15 4773077 4.68% 4773074
chr16 4341989 4.81% 4341988
chr17 5559236 6.68% 5559234
chr18 3569194 4.44% 3569191
chr19 3936858 6.72% 3936857
chr20 3987554 6.19% 3987548
chr21 1831002 3.92% 1831001
chr22 2281321 4.49% 2281317
chrX 3942582 2.53% 3942578
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 148801863 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c0__mean_pred_corrected.bw 1.1 GB 7367b50e647c3867d1d763538a2632f9
genomic_resource.yaml 1.27 KB ba624efba63f968cb27dc56c1a0ac2e1
statistics/