Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c1/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c1
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c1_mean_counts_contribs float

liu2026Multiomics_Skin_c1_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c1_mean_counts_contribs [-0.103, 0.222]
n
343,631,145
mean
0.000373
sd
0.00393

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 34363114510.71% 341485496
chr1 30579301 12.28% 30389844
chr2 29462941 12.17% 29278733
chr3 23395262 11.80% 23246196
chr4 18049067 9.49% 17929961
chr5 20612492 11.35% 20482071
chr6 21489491 12.58% 21354940
chr7 18176187 11.41% 18061399
chr8 16357067 11.27% 16253719
chr9 15135769 10.94% 15040664
chr10 17585435 13.14% 17475318
chr11 17119266 12.67% 17014614
chr12 16399493 12.30% 16297700
chr13 9707232 8.49% 9644789
chr14 10666006 9.96% 10599217
chr15 10850745 10.64% 10783886
chr16 10217374 11.31% 10155912
chr17 12919462 15.52% 12842902
chr18 8118339 10.10% 8065194
chr19 9465418 16.15% 9412133
chr20 8928893 13.86% 8874538
chr21 4225758 9.05% 4198723
chr22 5863616 11.54% 5829326
chrX 8304417 5.32% 8251616
chrY 2114 <0.01% 2101
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 341485496 1 991 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c1__mean_counts_contribs.bw 2.07 GB 78fb6b127e4cba8594713e0bec407948
genomic_resource.yaml 1.3 KB dad0445bc4f3140fad5d34320f9fe624
statistics/