Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c1/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c1_mean_pred_corrected float

liu2026Multiomics_Skin_c1_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Skin_c1_mean_pred_corrected [0.000205, 139]
n
185,895,426
mean
0.548
sd
1.57

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1858954265.79% 185895003
chr1 16638167 6.68% 16638127
chr2 15909000 6.57% 15908954
chr3 12595196 6.35% 12595158
chr4 9639832 5.07% 9639813
chr5 11112174 6.12% 11112146
chr6 11615380 6.80% 11615350
chr7 9790273 6.14% 9790253
chr8 8772156 6.04% 8772138
chr9 8205195 5.93% 8205175
chr10 9506231 7.10% 9506211
chr11 9314752 6.90% 9314722
chr12 8908608 6.68% 8908594
chr13 5188225 4.54% 5188214
chr14 5779810 5.40% 5779800
chr15 5887894 5.77% 5887888
chr16 5535024 6.13% 5535016
chr17 7125832 8.56% 7125821
chr18 4363664 5.43% 4363652
chr19 5262096 8.98% 5262089
chr20 4811118 7.47% 4811105
chr21 2290533 4.90% 2290528
chr22 3196715 6.29% 3196709
chrX 4446551 2.85% 4446540
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 185895003 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c1__mean_pred_corrected.bw 1.37 GB 432ed1058851e5732176ba43e0e89d32
genomic_resource.yaml 1.27 KB bf5c933033d953f0f86c94bc386dc0ad
statistics/