Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c10/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c10
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c10_mean_counts_contribs float

liu2026Multiomics_Skin_c10_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c10_mean_counts_contribs [-0.101, 0.172]
n
211,366,762
mean
0.000291
sd
0.00377

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2113667626.59% 209670016
chr1 19584754 7.87% 19428772
chr2 17832291 7.36% 17687194
chr3 13946833 7.03% 13832739
chr4 10653991 5.60% 10562910
chr5 12329818 6.79% 12229035
chr6 13142368 7.69% 13037023
chr7 11129028 6.98% 11037761
chr8 9745869 6.71% 9666263
chr9 9263473 6.69% 9189728
chr10 10598001 7.92% 10512905
chr11 10709397 7.93% 10625590
chr12 10363833 7.78% 10280275
chr13 5705352 4.99% 5657625
chr14 6484812 6.06% 6433153
chr15 6756128 6.62% 6702129
chr16 6399504 7.08% 6349877
chr17 8436130 10.13% 8372268
chr18 4856431 6.04% 4816765
chr19 6625618 11.30% 6577657
chr20 5517004 8.56% 5473609
chr21 2407843 5.15% 2388632
chr22 3673991 7.23% 3645997
chrX 5204293 3.34% 5162109
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 209670016 1 956 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c10__mean_counts_contribs.bw 1.27 GB f5de6429b89f3a800fc2e60a357e1b38
genomic_resource.yaml 1.31 KB b2389cdec4cce5d17e767ffcfe88f82b
statistics/