Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c10/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c10
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c10
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c10_mean_pred_corrected float

liu2026Multiomics_Skin_c10_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c10_mean_pred_corrected [0.00162, 17.7]
n
110,276,137
mean
0.138
sd
0.306

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1102761373.44% 110276095
chr1 10269085 4.12% 10269081
chr2 9257184 3.82% 9257183
chr3 7241695 3.65% 7241693
chr4 5492671 2.89% 5492668
chr5 6403043 3.53% 6403041
chr6 6876617 4.03% 6876616
chr7 5771495 3.62% 5771492
chr8 5052830 3.48% 5052829
chr9 4829841 3.49% 4829839
chr10 5514950 4.12% 5514947
chr11 5619180 4.16% 5619178
chr12 5410099 4.06% 5410098
chr13 2934270 2.57% 2934270
chr14 3400148 3.18% 3400146
chr15 3525406 3.46% 3525405
chr16 3359293 3.72% 3359290
chr17 4478531 5.38% 4478527
chr18 2501051 3.11% 2501049
chr19 3572698 6.09% 3572697
chr20 2871168 4.46% 2871168
chr21 1258381 2.69% 1258381
chr22 1924056 3.79% 1924055
chrX 2712445 1.74% 2712442
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 110276095 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c10__mean_pred_corrected.bw 836.0 MB a1046751e656d859e8ea1098b39e1f52
genomic_resource.yaml 1.27 KB d9d9f2e00453245a3a9b6242bb585d00
statistics/