Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c11/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c11
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c11_mean_counts_contribs float

liu2026Multiomics_Skin_c11_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c11_mean_counts_contribs [-0.0399, 0.121]
n
130,443,929
mean
0.000133
sd
0.00301

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1304439294.06% 129381023
chr1 12908620 5.19% 12804937
chr2 10729699 4.43% 10641311
chr3 8332869 4.20% 8263123
chr4 5774373 3.04% 5722602
chr5 6830057 3.76% 6773202
chr6 7665565 4.49% 7602204
chr7 6456648 4.05% 6404150
chr8 5686458 3.92% 5639346
chr9 5717430 4.13% 5670910
chr10 6402819 4.79% 6349202
chr11 7032079 5.21% 6976185
chr12 6162208 4.62% 6112409
chr13 2967336 2.59% 2942340
chr14 4153619 3.88% 4120556
chr15 4254336 4.17% 4219545
chr16 4415966 4.89% 4382140
chr17 6238530 7.49% 6189111
chr18 2636499 3.28% 2613440
chr19 5292381 9.03% 5253531
chr20 3461493 5.37% 3434356
chr21 1535021 3.29% 1522255
chr22 2771727 5.45% 2750403
chrX 3016082 1.93% 2991672
chrY 2114 <0.01% 2093
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129381023 1 992 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c11__mean_counts_contribs.bw 801.15 MB b6d00a7202287c9277012eddaa67833d
genomic_resource.yaml 1.31 KB 7a6e0d133c9ed478db3d465ec7959922
statistics/