Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c11/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c11
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c11
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c11_mean_pred_corrected float

liu2026Multiomics_Skin_c11_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c11_mean_pred_corrected [0.00164, 11.7]
n
67,666,089
mean
0.0981
sd
0.183

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 676660892.11% 67666071
chr1 6727264 2.70% 6727261
chr2 5540321 2.29% 5540320
chr3 4301390 2.17% 4301389
chr4 2970240 1.56% 2970240
chr5 3511534 1.93% 3511534
chr6 3979535 2.33% 3979533
chr7 3330685 2.09% 3330685
chr8 2934933 2.02% 2934933
chr9 2967168 2.14% 2967168
chr10 3304351 2.47% 3304351
chr11 3655141 2.71% 3655137
chr12 3209783 2.41% 3209783
chr13 1525818 1.33% 1525817
chr14 2164794 2.02% 2164792
chr15 2198448 2.16% 2198447
chr16 2294376 2.54% 2294376
chr17 3285642 3.95% 3285642
chr18 1351799 1.68% 1351799
chr19 2827476 4.82% 2827476
chr20 1785701 2.77% 1785699
chr21 791736 1.70% 791736
chr22 1434889 2.82% 1434888
chrX 1572065 1.01% 1572065
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 67666071 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c11__mean_pred_corrected.bw 512.79 MB b9d6c920cb978fd2fd0d6dc1fd28b979
genomic_resource.yaml 1.27 KB 6ee91f47778d1403d92250e986f45d72
statistics/