Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c12/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c12
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c12
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c12_mean_pred_corrected float

liu2026Multiomics_Skin_c12_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c12_mean_pred_corrected [0.0031, 14.7]
n
93,848,536
mean
0.119
sd
0.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 938485362.92% 93848488
chr1 8650444 3.47% 8650440
chr2 7811688 3.23% 7811684
chr3 6205074 3.13% 6205069
chr4 4652477 2.45% 4652477
chr5 5353191 2.95% 5353187
chr6 5859503 3.43% 5859500
chr7 4847954 3.04% 4847952
chr8 4321443 2.98% 4321438
chr9 4086445 2.95% 4086445
chr10 4545890 3.40% 4545888
chr11 4864320 3.60% 4864317
chr12 4686054 3.52% 4686052
chr13 2445131 2.14% 2445130
chr14 2926712 2.73% 2926709
chr15 2987529 2.93% 2987527
chr16 2962223 3.28% 2962222
chr17 3968784 4.77% 3968782
chr18 2011377 2.50% 2011377
chr19 3322276 5.67% 3322276
chr20 2394076 3.71% 2394075
chr21 1078833 2.31% 1078831
chr22 1729034 3.40% 1729034
chrX 2137078 1.37% 2137076
chrY 1000 <0.01% 1000
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93848488 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c12__mean_pred_corrected.bw 710.95 MB 88b771dbe0873c2a08b145f25727a2e8
genomic_resource.yaml 1.27 KB d8b268427cd88d3b0019ac5022aa74c3
statistics/