Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c13/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c13
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c13_mean_counts_contribs float

liu2026Multiomics_Skin_c13_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c13_mean_counts_contribs [-0.0485, 0.125]
n
153,922,261
mean
0.000216
sd
0.00329

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1539222614.80% 152610197
chr1 14284638 5.74% 14163104
chr2 12728754 5.26% 12619074
chr3 10140920 5.11% 10053401
chr4 7379377 3.88% 7312784
chr5 9029609 4.97% 8951013
chr6 9583010 5.61% 9500559
chr7 7851960 4.93% 7783951
chr8 7083418 4.88% 7022690
chr9 6704744 4.84% 6648237
chr10 7761687 5.80% 7695655
chr11 7921711 5.86% 7855474
chr12 7455691 5.59% 7391782
chr13 4078329 3.57% 4042346
chr14 4792879 4.48% 4752037
chr15 4933295 4.84% 4891794
chr16 4790177 5.30% 4750821
chr17 6523981 7.84% 6470417
chr18 3303290 4.11% 3274878
chr19 5348803 9.12% 5306756
chr20 4147581 6.44% 4113077
chr21 1820690 3.90% 1805454
chr22 2738714 5.39% 2716298
chrX 3519003 2.26% 3488595
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 152610197 1 906 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c13__mean_counts_contribs.bw 946.73 MB 53f916135687ea5084f10c3b432b24cd
genomic_resource.yaml 1.31 KB decb37ee933c350a8d0e1d2033c4c549
statistics/