Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c13/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c13
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c13
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c13_mean_pred_corrected float

liu2026Multiomics_Skin_c13_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c13_mean_pred_corrected [0.00199, 10.7]
n
79,339,145
mean
0.0883
sd
0.168

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 793391452.47% 79339121
chr1 7387999 2.97% 7387996
chr2 6527659 2.70% 6527658
chr3 5225779 2.64% 5225776
chr4 3773161 1.98% 3773160
chr5 4636584 2.55% 4636582
chr6 4951835 2.90% 4951831
chr7 4019179 2.52% 4019179
chr8 3643167 2.51% 3643166
chr9 3449806 2.49% 3449806
chr10 3996735 2.99% 3996734
chr11 4097898 3.03% 4097895
chr12 3846234 2.89% 3846233
chr13 2084671 1.82% 2084670
chr14 2472338 2.31% 2472338
chr15 2545250 2.50% 2545249
chr16 2475132 2.74% 2475130
chr17 3395889 4.08% 3395889
chr18 1685892 2.10% 1685892
chr19 2837397 4.84% 2837397
chr20 2128386 3.30% 2128386
chr21 934992 2.00% 934992
chr22 1412271 2.78% 1412271
chrX 1810891 1.16% 1810891
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 79339121 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c13__mean_pred_corrected.bw 601.63 MB e5350e5d8d5ad0f8108ee7352f87f123
genomic_resource.yaml 1.27 KB 7e87974e43264b67457f75c406c66e13
statistics/