Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c14/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c14
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c14
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c14_mean_pred_corrected float

liu2026Multiomics_Skin_c14_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c14_mean_pred_corrected [0.000615, 3.64]
n
62,842,494
mean
0.048
sd
0.079

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 628424941.96% 62842471
chr1 5802753 2.33% 5802749
chr2 5240787 2.16% 5240783
chr3 4190795 2.11% 4190794
chr4 3126783 1.64% 3126782
chr5 3699684 2.04% 3699684
chr6 3817928 2.24% 3817928
chr7 3203767 2.01% 3203766
chr8 2920625 2.01% 2920624
chr9 2712373 1.96% 2712372
chr10 3132911 2.34% 3132909
chr11 3148852 2.33% 3148850
chr12 3038189 2.28% 3038187
chr13 1684566 1.47% 1684565
chr14 1952878 1.82% 1952877
chr15 2025842 1.99% 2025841
chr16 1931165 2.14% 1931165
chr17 2671835 3.21% 2671834
chr18 1346244 1.67% 1346244
chr19 2250700 3.84% 2250700
chr20 1662010 2.58% 1662010
chr21 708309 1.52% 708309
chr22 1018673 2.00% 1018673
chrX 1554825 1.00% 1554825
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62842471 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c14__mean_pred_corrected.bw 477.45 MB c4c8da8705760201559060467f57a4bf
genomic_resource.yaml 1.27 KB adfd85d2390d7c7ae19e15811fe19cb6
statistics/