Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c15/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Skin for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c15
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c15_mean_counts_contribs float

liu2026Multiomics_Skin_c15_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Skin_c15_mean_counts_contribs [-0.0488, 0.0903]
n
104,677,126
mean
9.44e-05
sd
0.00278

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1046771263.26% 103724722
chr1 9991157 4.01% 9899995
chr2 8470599 3.50% 8393097
chr3 6800732 3.43% 6737934
chr4 4856753 2.55% 4811271
chr5 5952428 3.28% 5897549
chr6 6455030 3.78% 6396249
chr7 5244556 3.29% 5196277
chr8 4700659 3.24% 4657138
chr9 4568190 3.30% 4526323
chr10 5146003 3.85% 5099506
chr11 5413168 4.01% 5364770
chr12 5151185 3.87% 5104581
chr13 2502725 2.19% 2479139
chr14 3278724 3.06% 3248702
chr15 3309955 3.25% 3280064
chr16 3418564 3.78% 3388424
chr17 4701212 5.65% 4659701
chr18 2153343 2.68% 2132486
chr19 4340355 7.40% 4303460
chr20 2761782 4.29% 2737110
chr21 1163921 2.49% 1153534
chr22 1902480 3.74% 1885609
chrX 2393605 1.53% 2371803
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 103724722 1 979 1.01 1
global segment-length histogram

Files

Filename Size md5
Skin_c15__mean_counts_contribs.bw 643.5 MB ae02b26db34a8cbbf8c52a9f5b6dca06
genomic_resource.yaml 1.31 KB 626f2b682d8dcead57ff003547af9951
statistics/