Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Skin/c15/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Skin for cell cluster c15
Description
Labels
  • assay: SHARE-seq
  • cluster: Skin_c15
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Skin
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Skin_c15_mean_pred_corrected float

liu2026Multiomics_Skin_c15_mean_pred_corrected
bias-corrected accessibility predicted by ChromBPNet
 HISTOGRAM FOR liu2026Multiomics_Skin_c15_mean_pred_corrected [0.000785, 5.02]
n
53,145,453
mean
0.0575
sd
0.0976

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 531454531.66% 53145432
chr1 5096006 2.05% 5096004
chr2 4282049 1.77% 4282048
chr3 3446059 1.74% 3446058
chr4 2450208 1.29% 2450208
chr5 3006236 1.66% 3006235
chr6 3284857 1.92% 3284855
chr7 2644614 1.66% 2644611
chr8 2374884 1.64% 2374884
chr9 2304395 1.67% 2304395
chr10 2614391 1.95% 2614390
chr11 2762215 2.04% 2762214
chr12 2618668 1.96% 2618668
chr13 1255947 1.10% 1255946
chr14 1666724 1.56% 1666723
chr15 1676695 1.64% 1676695
chr16 1739522 1.93% 1739521
chr17 2409896 2.89% 2409895
chr18 1084018 1.35% 1084018
chr19 2256709 3.85% 2256706
chr20 1399109 2.17% 1399108
chr21 592068 1.27% 592067
chr22 962169 1.89% 962169
chrX 1218014 0.78% 1218014
432 contigs with no values (178243688 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 53145432 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Skin_c15__mean_pred_corrected.bw 403.12 MB df090414e985a4f99c2b87ace3f6c0f8
genomic_resource.yaml 1.27 KB 00e4c36a42298012b79fd9122ee0ff75
statistics/